Khilafat Movement provided an opportunity to the Ulema of sub-continent to take part in active politics, however, Anjuman-i-Khuddam-i-Kaaba which was the first ever organized confrontation with the British raj. It eventually resulted in the formation of Jamiat Ulema-i-Hind (JUH). Although Majlis-iAhrar-i-Islam, emerged as an effective instrument of Deobandi activism yet it denounced the creation of an independent Muslim state. Majority of Ulema believed that with the demise of British regime in India, the Muslims being a strong minority, could not be impoverished, therefore, JUH worked closely with the Congress. Interestingly, the history of the Ulema has been one of their perpetual conflicts with intelligentsia and the creation of Pakistan by the moderate leadership was a great setback for the “nationalist” Ulema. However, they failed to create a political constituency and continued to tag along with the Muslim League. Yet, JUI time and again denounced socialism and advocated the Islamic system for Pakistan. After 1970 Elections, both NAP and JUI emerged as majority parties in NWFP and Baluchistan. During the study, it will be analyzed that how JUI, a conservative Islamic party could form an alliance with NAP that had won the elections on the basis of secular ideas.